PavVEL1, PavVEL1 (genetic_marker) Prunus avium

Marker Overview
NameVEL1
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:VEL1
TypeSNP
SNP AllelesT/G
5' Flanking SequenceTACCAACGATGTAATTGTGATAAGTAATTAGTTTCATATGATCTTTTCAT
3' Flanking SequenceTATGTTATACCAGAGTTGTCTAGTTTCTTCGTTTCTCTCATCACAAAAAA
SpeciesPrunus avium
Publication[view all]
ContactStijn Vanderzande
Comment'Regina' [T/T] 'Lapins' [G/T] 'Garnet' [T/T]
Contact
NameDetails
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
VEL1VEL1Prunus aviummarker_locus


Sequence
>VEL1 ID=VEL1|Name=VEL1|organism=Prunus avium|type=genetic_marker|length=101bp
TACCAACGATGTAATTGTGATAAGTAATTAGTTTCATATGATCTTTTCAT
KTATGTTATACCAGAGTTGTCTAGTTTCTTCGTTTCTCTCATCACAAAAA
A
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RL-F1-2015L1N/A7.71VEL1View
2Sweet Cherry-RosBREED-3.8K-20201N/A13.45VEL1View
Alignments
Feature NameTypeLocationAnalysis
Pp01 chromosome Pp01:6290931..6290931. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr1 chromosome PAV_r1.0chr1:4730946..4730946. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)