Beacon

Germplasm Overview
NameBeacon
AliasN/A
GRIN IDPI 589885
TypeCultivar
SpeciesMalus x domestica
DescriptionDessert cultivar
Origin CountryN/A
Origin DetailN/A
PedigreeN/A
Maternal ParentMalinda
Paternal ParentN/A
Maternal Parent ofN/A
Paternal Parent ofN/A
Phenotypic Data[view all 229]
SSR Genotype Data[view all 3]
SNP Genotype Data[view all 7559]
MapN/A
DNA LibraryN/A
SequenceN/A
CommentsN/A
ReferenceN/A
Ssr Genotype Data
Total 3 records
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# Dataset Marker Marker Type Genotype Marker_Allele
1Apple_CRS_genotyping_SSR_2010CH05c06genetic_marker104|110CH05c06_104; CH05c06_110
2Apple_CRS_genotyping_SSR_2010Hi04e04genetic_marker216|225Hi04e04_216; Hi04e04_225
3Apple_CRS_genotyping_SSR_2010Md-Exp7genetic_marker202|210Md-Exp7_202; Md-Exp7_210
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Snp Genotype Data
Total 7,559 records
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#DatasetMarker NameAlleleGenotype
1Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AC_121548_Lg1_00288_MAF30_MDP0000151845_exon1T/GAA
2Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_124604_Lg1_00288_MAF50_MDP0000929646_exon2T/CGA
3Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_154698_Lg1_00288_MAF50_285078_exon1T/CTT
4Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_2754910_Lg1_00370_MAF10_MDP0000147384_exon7T/CCT
5Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_3094248_Lg1_02894_MAF50_285661_exon1T/CTC
6Dessert_and_cider_core_collections_8k_SNPGDsnp02894A/GGG
7Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GA_3099492_Lg1_02894_MAF40_411283_exon1A/GAA
8Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AG_4746500_Lg1_MDP0000213515_MAF40_MDP0000213515_exon1A/GAG
9Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AG_5237634_Lg1_01826_MAF20_1669688_exon1A/GAG
10Dessert_and_cider_core_collections_8k_SNPGDsnp01826A/GAG
11Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_5268615_Lg1_01826_MAF40_580938_exon1T/CCT
12Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_5273262_Lg1_01826_MAF30_99144_exon1T/CCT
13Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AC_5846218_Lg1_00152_MAF20_MDP0000311299_exon1A/CAA
14Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_GT_5848920_Lg1_00152_MAF10_MDP0000935969_exon1T/GTT
15Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_5860779_Lg1_00152_MAF10_MDP0000483599_exon1T/CTT
16Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_5864041_Lg1_00152_MAF30_218788_exon2T/CTT
17Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_5940163_Lg1_00152_MAF50_1642197_exon1T/CCT
18Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TG_6128721_Lg1_MDP0000375685__MDP0000375685_exon1T/GGG
19Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AG_7983432_Lg1_54086_MAF20_54086_exon1A/GAA
20Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_8781083_Lg1_02428_MAF10_1668209_exon1T/CTC
21Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AG_8776668_Lg1_02428_MAF20_157084_exon1A/GAG
22Dessert_and_cider_core_collections_8k_SNPGDsnp02428T/GCC
23Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_TC_9351463_Lg1_00703_MAF20_MDP0000661406_exon4T/CTC
24Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_CT_9505772_Lg1_02580_MAF30_MDP0000570507_exon19T/CTT
25Dessert_and_cider_core_collections_8k_SNPRosBREEDSNP_SNP_AG_9497464_Lg1_02580_MAF40_1622059_exon2T/CAA
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Cross References
External references for this accession
DatabaseAccession
GRINPI 589885
Fruit and Nut Cultivars Database11141
Phenotypic Data
Phenotypic Data
Total 229 trait scores
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# Dataset Descriptor Value
1Apple_CRS_phenotyping_2011CropLoad4
2Apple_CRS_phenotyping_2011Dropping1
3Apple_CRS_phenotyping_2011HarvestYear2011
4Apple_CRS_phenotyping_2011Location1
5Apple_CRS_phenotyping_2011GrndCol_01
6Apple_CRS_phenotyping_2011SkinCol_04
7Apple_CRS_phenotyping_2011OvrColType_03
8Apple_CRS_phenotyping_2011PercOvrCol_05
9Apple_CRS_phenotyping_2011Russet_Loc_01
10Apple_CRS_phenotyping_2011RussLoc1_01
11Apple_CRS_phenotyping_2011RussLoc2_00
12Apple_CRS_phenotyping_2011RussLoc3_00
13Apple_CRS_phenotyping_2011RussLoc4_00
14Apple_CRS_phenotyping_2011RussAmt_02
15Apple_CRS_phenotyping_2011Crack_01
16Apple_CRS_phenotyping_2011Shape_05
17Apple_CRS_phenotyping_2011CalyxO_01
18Apple_CRS_phenotyping_2011SunBurn_01
19Apple_CRS_phenotyping_2011CoreO_01
20Apple_CRS_phenotyping_2011StarchRxn_06.8
21Apple_CRS_phenotyping_2011Mass_g_0111.58372302
22Apple_CRS_phenotyping_2011Mass_g_1084.444
23Apple_CRS_phenotyping_2011Mass_g_2081.72
24Apple_CRS_phenotyping_2011DigiDate_08/31/2011
25Apple_CRS_phenotyping_2011DigiDate_1011/18/2011
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