s4_5421765, s4_5421765 (genetic_marker) Prunus avium

Marker Overview
Names4_5421765
dbSNP IDN/A
TypeSNP
SNP AllelesT/C
5' Flanking SequenceTTCTATTGTCACAGTAAAACGACTTACTTGGTTATTCCAAATTGTAGCTGCTATGTGAGT TTTAAAACTCGTAAGTAAAGATGGATCAATGAGACCTACTCGAGATGGCTCAGTAGGCTC GGCATGTACCTCAACATTACTATCATGAGT
3' Flanking SequenceGCAGCTACATCTTCAACCTCTGTGTCAACATTACTATCATGAGTAAGAGCTACATCTTCA ACCTCTGTAGTATCCTTAAAGTCATCTTGGGGAGCCGTTCTCTGTCTCTTCATTGAGGCT GTGGGACGCTGTTTATCAAGTCGAGATGAT
SpeciesPrunus avium
Publication[view all]
ContactPatricio Hinrichsen
Stijn Vanderzande
Commentsweet cherry SNPs identified by GBS from Guajardo et al (2015), unmapped - intergenic SNPs
Contact
NameDetails
Patricio Hinrichsen
First name:Patricio
Last name:Hinrichsen
Title:Investigator, R&D SubDirector
Institution:Instituto de Investigaciones Agropecuarias (INIA) La Platina
Address:Santa Rosa 11610, La Pintana
Country:Chile
Email:phinrichsen@inia.cl
Phone:56 2 25779101
Fax:56 2 25779104
Keywords:Plant genetics and breeding
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
s4_5421765s4_5421765Prunus aviummarker_locus


Sequence
>s4_5421765 ID=s4_5421765|Name=s4_5421765|organism=Prunus avium|type=genetic_marker|length=301bp
TTCTATTGTCACAGTAAAACGACTTACTTGGTTATTCCAAATTGTAGCTG
CTATGTGAGTTTTAAAACTCGTAAGTAAAGATGGATCAATGAGACCTACT
CGAGATGGCTCAGTAGGCTCGGCATGTACCTCAACATTACTATCATGAGT
YGCAGCTACATCTTCAACCTCTGTGTCAACATTACTATCATGAGTAAGAG
CTACATCTTCAACCTCTGTAGTATCCTTAAAGTCATCTTGGGGAGCCGTT
CTCTGTCTCTTCATTGAGGCTGTGGGACGCTGTTTATCAAGTCGAGATGA
T
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet_cherry_RaxRi_F1-physical-Prunus-persicaV1.0scaffold 4N/A5421765s4_5421765View
Alignments
Feature NameTypeLocationAnalysis
Pp04 chromosome Pp04:6091925..6091925. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)