s6_25192673, s6_25192673 (genetic_marker) Prunus avium

Marker Overview
Names6_25192673
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:s6_25192673
TypeSNP
SNP AllelesT/G
5' Flanking SequenceTTGGAAAAGATTAGATGCTCGGGAAATCCAACCAAGCTTTCGTCCTCAAGTTTCTGGGAA
3' Flanking SequenceCAG
SpeciesPrunus avium
Publication[view all]
ContactPatricio Hinrichsen
Stijn Vanderzande
Commentsweet cherry SNPs identified by GBS from Guajardo et al (2015), unmapped - intergenic SNPs
Contact
NameDetails
Patricio Hinrichsen
First name:Patricio
Last name:Hinrichsen
Title:Investigator, R&D SubDirector
Institution:Instituto de Investigaciones Agropecuarias (INIA) La Platina
Address:Santa Rosa 11610, La Pintana
Country:Chile
Email:phinrichsen@inia.cl
Phone:56 2 25779101
Fax:56 2 25779104
Keywords:Plant genetics and breeding
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet_cherry_RaxRi_F1-physical-Prunus-persicaV1.0scaffold 6N/A25192673s6_25192673View
Sequence
>s6_25192673 ID=s6_25192673; Name=s6_25192673; organism=Prunus avium; type=genetic_marker; length=64bp
TTGGAAAAGATTAGATGCTCGGGAAATCCAACCAAGCTTTCGTCCTCAAG
TTTCTGGGAAKCAG
Alignments
Feature NameTypeLocationAnalysis
Pp06 chromosome Pp06:27057279..27057279. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr6 chromosome PAV_r1.0chr6:20384206..20384206. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)