NZmsCN943818, NZmsCN943818 (genetic_marker) Malus x domestica | GDR

Marker Overview

Marker Overview


Name	NZmsCN943818
Genbank ID	N/A
Type	SSR
Species	Malus x domestica
Repeat Motif	(ATG)4
Primer 1	NZmsCN943818.F: CGGGAAGAGGAAATGTGATT
Primer 2	NZmsCN943818.R: TGAACAGCTCATCGTCGGTA
Publication	[view all]
Contact	S. Gardiner

Contact

Name

Details

S. Gardiner

First name:	Sue
Last name:	Gardiner
Institution:	HortResearch, New Zealand
Address:	HortResearch Palmerston North Tennent Drive Private Bag 11 030 Palmerston North, New Zealand
Email:	sgardiner@hortresearch.co.nz
Phone:	64-6-356 8080

Publications


Year	Publication
2008	Peil A, Hanke M, Flachowsky H, Garcia-Libreros T, Horner M, Bus V, Richter K, Celton J, Gardiner S. Confirmation of the fire blight QTL of Malus x robusta 5 on linkage group 3. Acta horticulturae. 2008; (793)297-303.
2009	Celton J-M, Tustin DS, Chagne D, Gardiner SE. Construction of a dense genetic linkage map for apple rootstocks using SSRs developed from Malus ESTs and Pyrus genomic sequences. Tree Genetics and Genomes. 2009; 5(1):93-107.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Apple-M9xR5-F1-2008	LG3	N/A	43	NZmsCN943818	View
2	Apple-JM7xS63-F1	J3	N/A	29.6	NZmsCN943818	View

Alignments

Feature Name	Type	Location	Analysis
Chr03	chromosome	Chr03:29197152..29197349.	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr3A	chromosome	chr3A:27659835..27660032.	Malus x domestica ‘Honeycrisp’ Genome v1.1.a1 Assembly & Annotation