AX-89812371, AX-89812371 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812371
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88809262
TypeSNP
SNP AllelesA/G
Probe 1AX-89812371.AX-89812371: CAGTAGTATGCGTATTTTAGGTCAGACTTC
5' Flanking SequenceACTTGGTCATCATACGCATAAAATCCAGTCTGAAG
3' Flanking SequenceGGCTGTCTTTCAAAACATCTGAAAGTATCATATTG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812371 ID=AX-89812371; Name=AX-89812371; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ACTTGGTCATCATACGCATAAAATCCAGTCTGAAGRGGCTGTCTTTCAAA
ACATCTGAAAGTATCATATTG
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:527489..527559- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:2492927..2492997+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:4815499..4815569+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:27006790..27006860+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-4 chromosome Fvb5-4:21145048..21145118- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:671574..671643- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:214855..214855. Fragaria vesca Whole Genome v1.1 Assembly & Annotation