AX-89869390, AX-89869390 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869390
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88809276
TypeSNP
SNP AllelesA/G
Probe 1AX-89869390.AX-89869390: ACTGTCTTTACATTACGTCCTTTCTTAAGG
5' Flanking SequenceACCTCCGAGGGTATCTTCTTATCTTGTATCTGTTT
3' Flanking SequenceGGAATTCTTTCCTGCATTACATTTCTGTCACTCCG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869390 ID=AX-89869390; Name=AX-89869390; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ACCTCCGAGGGTATCTTCTTATCTTGTATCTGTTTRGGAATTCTTTCCTG
CATTACATTTCTGTCACTCCG
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:505450..505520- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:2509783..2509853+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:4835207..4835277+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:27023464..27023534+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:655833..655903- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:236894..236894. Fragaria vesca Whole Genome v1.1 Assembly & Annotation