AX-89869416, AX-89869416 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869416
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88809369
TypeSNP
SNP AllelesA/C
Probe 1AX-89869416.AX-89869416: TAACAGGTACCAGATATATAGACCTCGGGG
5' Flanking SequenceTCTGTGTAGGACTGCCCGCACCCAACAAACATGAC
3' Flanking SequenceGGGGCTCCAGATATATAGACCATGGACAATGCAGC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869416 ID=AX-89869416; Name=AX-89869416; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TCTGTGTAGGACTGCCCGCACCCAACAAACATGACMGGGGCTCCAGATAT
ATAGACCATGGACAATGCAGC
Alignments
Feature NameTypeLocationAnalysis
Fvb2 chromosome Fvb2:10841708..10841778- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:408711..408781- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2-2 chromosome Fvb2-2:15232315..15232385+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:521891..521961+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:4910306..4910376+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:27121083..27121153+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:333633..333633. Fragaria vesca Whole Genome v1.1 Assembly & Annotation