AX-89812395, AX-89812395 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812395
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88809370
TypeSNP
SNP AllelesA/G
Probe 1AX-89812395.AX-89812395: ATAAGGTAGATAGTTAGACCCCAACCCACT
5' Flanking SequenceAGCAATATTCCATCTATCAATCTGGGGTTGGGTGA
3' Flanking SequenceGGTGATAGATCAGCCAGTTTCTGCAAGAACAGTGT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812395 ID=AX-89812395; Name=AX-89812395; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AGCAATATTCCATCTATCAATCTGGGGTTGGGTGARGGTGATAGATCAGC
CAGTTTCTGCAAGAACAGTGT
Alignments
Feature NameTypeLocationAnalysis
Fvb2 chromosome Fvb2:10841485..10841555- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:408488..408558- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2-3 chromosome Fvb2-3:15465518..15465588+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-2 chromosome Fvb2-2:15232538..15232608+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:522103..522173+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:4910518..4910588+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:27121306..27121376+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:333856..333856. Fragaria vesca Whole Genome v1.1 Assembly & Annotation