AX-89812281, AX-89812281 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812281
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88809888
TypeSNP
SNP AllelesA/C
Probe 1AX-89812281.AX-89812281: TATAGAGTGAAGATTGAAGATTTGGTTTGG
5' Flanking SequenceCCAAAATATCTCACTTCTAACTTCTAAACCAAACC
3' Flanking SequenceAACACTTTCCTTATTTAACGTTACTGTTTCATCCC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812281 ID=AX-89812281; Name=AX-89812281; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CCAAAATATCTCACTTCTAACTTCTAAACCAAACCMAACACTTTCCTTAT
TTAACGTTACTGTTTCATCCC
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:2450747..2450817- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:756418..756488+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:3307317..3307394+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:25353774..25353850+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:2182754..2182815- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:1574034..1574034. Fragaria vesca Whole Genome v1.1 Assembly & Annotation