AX-89869406, AX-89869406 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869406
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88810838
TypeSNP
SNP AllelesA/G
Probe 1AX-89869406.AX-89869406: TATCCAACAGACTGTTGGTTTACATTCCAC
5' Flanking SequenceATTTTCTTAACATGATTTAGATGTTGAGGATGGCC
3' Flanking SequenceCACCTTACATTTGGTTGTCAGACAACCTATTCCAC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869406 ID=AX-89869406; Name=AX-89869406; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ATTTTCTTAACATGATTTAGATGTTGAGGATGGCCRCACCTTACATTTGG
TTGTCAGACAACCTATTCCAC
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:944104..944174- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:2093434..2093504+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:4514041..4514111+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:26625933..26626003+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:1030689..1030759- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:3080677..3080677. Fragaria vesca Whole Genome v1.1 Assembly & Annotation