AX-89812390, AX-89812390 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812390
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88810948
TypeSNP
SNP AllelesA/C
Probe 1AX-89812390.AX-89812390: AAGTTTAATGGAATTAAAGTAAACGGTAGA
5' Flanking SequenceACAGGTTCAAATTACCTTAATTTCATTTGCCATCT
3' Flanking SequenceGGGACTAATATTGACTTGTTGATAAATTCCAGACC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812390 ID=AX-89812390; Name=AX-89812390; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ACAGGTTCAAATTACCTTAATTTCATTTGCCATCTMGGGACTAATATTGA
CTTGTTGATAAATTCCAGACC
Alignments
Feature NameTypeLocationAnalysis
Fvb4 chromosome Fvb4:24978084..24978116+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:1895867..1895937+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:784505..784575- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb4-3 chromosome Fvb4-3:10258547..10258579+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-4 chromosome Fvb1-4:2266600..2266670+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:4645992..4646061+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:26806397..26806467+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-4 chromosome Fvb1-4:1282964..1283034- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:883026..883095- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:3240276..3240276. Fragaria vesca Whole Genome v1.1 Assembly & Annotation