AX-89812391, AX-89812391 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812391
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88810951
TypeSNP
SNP AllelesA/G
Probe 1AX-89812391.AX-89812391: GTCTACCTCCCAATCGTCGACGTTCTTGTC
5' Flanking SequenceACGTCCAGATGGAGGGTTAGCAGCTGCAAGAACAG
3' Flanking SequenceGGTTCTAGAATTAAGAACTGTCGTTATTCCTGCTT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812391 ID=AX-89812391; Name=AX-89812391; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ACGTCCAGATGGAGGGTTAGCAGCTGCAAGAACAGRGGTTCTAGAATTAA
GAACTGTCGTTATTCCTGCTT
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:783339..783409- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:2267766..2267836+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:4647158..4647228+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:26807563..26807633+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:881859..881929- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:3241442..3241442. Fragaria vesca Whole Genome v1.1 Assembly & Annotation