AX-89869414, AX-89869414 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869414
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88811011
TypeSNP
SNP AllelesT/G
Probe 1AX-89869414.AX-89869414: TTACAGCGGCTCGCTAGTTCTTTCTCCGGG
5' Flanking SequenceCGGCGGTGAGCAGTAGAGGAGGGCGATTTGTGGCC
3' Flanking SequenceGGGCCTCTTTCTTGATCGCTCGGCGACATTGTTTT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869414 ID=AX-89869414; Name=AX-89869414; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CGGCGGTGAGCAGTAGAGGAGGGCGATTTGTGGCCKGGGCCTCTTTCTTG
ATCGCTCGGCGACATTGTTTT
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:702993..703063- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:716830..716900- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:661508..661557- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:2335046..2335116+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-4 chromosome Fvb1-4:2368588..2368640+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:26876227..26876297+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:799605..799678- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:3321788..3321788. Fragaria vesca Whole Genome v1.1 Assembly & Annotation