AX-89869424, AX-89869424 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869424
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88811150
TypeSNP
SNP AllelesA/C
Probe 1AX-89869424.AX-89869424: TTTTGCTTCGAGTTTTGAGTGGTGTTCCTC
5' Flanking SequenceAGGACCGGTAACGATGCTTACCTCAGCCTCGTTCC
3' Flanking SequenceCTCCTTGTGGTGAGTTTTGAGCTTCGTTTTCATTC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869424 ID=AX-89869424; Name=AX-89869424; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AGGACCGGTAACGATGCTTACCTCAGCCTCGTTCCMCTCCTTGTGGTGAG
TTTTGAGCTTCGTTTTCATTC
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:18241713..18241776- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5 chromosome Fvb5:25120157..25120227- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-4 chromosome Fvb7-4:4903839..4903898+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:6477718..6477770+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:5994575..5994627+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-4 chromosome Fvb3-4:24291926..24291985+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-4 chromosome Fvb3-4:3294686..3294745+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:7689113..7689172+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-4 chromosome Fvb7-4:4588580..4588639- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:24036459..24036518- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:25811191..25811255- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-1 chromosome Fvb5-1:26169570..26169640- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:8472085..8472144- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:15428875..15428934- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:3681652..3681652. Fragaria vesca Whole Genome v1.1 Assembly & Annotation