AX-89869425, AX-89869425 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869425
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88811155
TypeSNP
SNP AllelesT/G
Probe 1AX-89869425.AX-89869425: CATGTCTTACTACACCCCTATAGATAAGGG
5' Flanking SequenceCCCACCTGCCGTCTTTGTGAATCTTGTTCTTCTTC
3' Flanking SequenceGGGAATAGATATCCCCACATCATTCTGTACATTGT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869425 ID=AX-89869425; Name=AX-89869425; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CCCACCTGCCGTCTTTGTGAATCTTGTTCTTCTTCKGGGAATAGATATCC
CCACATCATTCTGTACATTGT
Alignments
Feature NameTypeLocationAnalysis
Fvb5 chromosome Fvb5:25113569..25113639- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5-4 chromosome Fvb5-4:21265089..21265159- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-2 chromosome Fvb5-2:21178570..21178640- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-1 chromosome Fvb5-1:26163125..26163195- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:3688240..3688240. Fragaria vesca Whole Genome v1.1 Assembly & Annotation