AX-89812402, AX-89812402 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812402
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88811194
TypeSNP
SNP AllelesA/G
Probe 1AX-89812402.AX-89812402: GATGTACTGAGTATCACCACCAATAGCAGG
5' Flanking SequenceGCTGACTACATGACTCATAGTGGTGGTTATCGTCC
3' Flanking SequenceATGAACAGATTTGGGGGAATAGCGGAGTCTACATC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812402 ID=AX-89812402; Name=AX-89812402; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GCTGACTACATGACTCATAGTGGTGGTTATCGTCCRATGAACAGATTTGG
GGGAATAGCGGAGTCTACATC
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:18726624..18726694- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5 chromosome Fvb5:25047010..25047080- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5 chromosome Fvb5:25631093..25631163- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-1 chromosome Fvb6-1:19402666..19402736+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-4 chromosome Fvb6-4:17149993..17150042- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:3754799..3754799. Fragaria vesca Whole Genome v1.1 Assembly & Annotation