AX-89812413, AX-89812413 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812413
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88811495
TypeSNP
SNP AllelesA/G
Probe 1AX-89812413.AX-89812413: TTCTCGTGGGAACAGAAGGAGCTGACTTTA
5' Flanking SequenceACCCAAAGAGCACCCTTGTCTTCCTCGACTGAAAT
3' Flanking SequenceGGGTCCAATTCCTTAATTTTAACCATCTCCAATGG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812413 ID=AX-89812413; Name=AX-89812413; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ACCCAAAGAGCACCCTTGTCTTCCTCGACTGAAATRGGGTCCAATTCCTT
AATTTTAACCATCTCCAATGG
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:3258109..3258179+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:3244987..3245057+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:3902298..3902367- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:2590049..2590119+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-4 chromosome Fvb1-4:2577133..2577203+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:2909699..2909769+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:2715824..2715894- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:1470704..1470774- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:24753144..24753213- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:4243227..4243227. Fragaria vesca Whole Genome v1.1 Assembly & Annotation