AX-89869440, AX-89869440 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869440
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88811711
TypeSNP
SNP AllelesA/G
Probe 1AX-89869440.AX-89869440: GTAACGTGATCTTTTGGTTTAACCCCTATA
5' Flanking SequenceTTCAGAGACTCAAATGATGTTATTCATCTCCCTCC
3' Flanking SequenceATATCCCCAATTTGGTTTTCTAGTGCAATGCCTGA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869440 ID=AX-89869440; Name=AX-89869440; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TTCAGAGACTCAAATGATGTTATTCATCTCCCTCCRATATCCCCAATTTG
GTTTTCTAGTGCAATGCCTGA
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:3543597..3543667+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:2867292..2867362+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:3176390..3176460+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:2422232..2422302- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:4528715..4528715. Fragaria vesca Whole Genome v1.1 Assembly & Annotation