AX-89869442, AX-89869442 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869442
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88811748
TypeSNP
SNP AllelesT/G
Probe 1AX-89869442.AX-89869442: GCCTTGTACAACCAACTACCCACAGTGTGG
5' Flanking SequenceAGCCACTCAACTATACTTTTAACCTGTGCTTCAGT
3' Flanking SequenceGGTGTGACACCCATCAACCAACATGTTCCGCTATA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869442 ID=AX-89869442; Name=AX-89869442; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AGCCACTCAACTATACTTTTAACCTGTGCTTCAGTKGGTGTGACACCCAT
CAACCAACATGTTCCGCTATA
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:3601186..3601256+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3 chromosome Fvb3:3648182..3648246- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3-4 chromosome Fvb3-4:25960470..25960534+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-2 chromosome Fvb3-2:316751..316815+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-4 chromosome Fvb1-4:2932741..2932811+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:2382692..2382762- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:24508813..24508883- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:4586304..4586304. Fragaria vesca Whole Genome v1.1 Assembly & Annotation