AX-89812429, AX-89812429 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812429
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88811970
TypeSNP
SNP AllelesT/G
Probe 1AX-89812429.AX-89812429: CACCGAATGGTACTGTAGGGTAAATACAGG
5' Flanking SequenceTGACAGTGGCTTACCATGACATCCCATTTATGTCC
3' Flanking SequenceGGCCTAAGAGAACCACGCATTTGCAGAACCATCCT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812429 ID=AX-89812429; Name=AX-89812429; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TGACAGTGGCTTACCATGACATCCCATTTATGTCCKGGCCTAAGAGAACC
ACGCATTTGCAGAACCATCCT
Alignments
Feature NameTypeLocationAnalysis
Fvb5 chromosome Fvb5:21913614..21913684+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:26543385..26543447- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-4 chromosome Fvb5-4:18561219..18561289- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-3 chromosome Fvb5-3:7434620..7434690- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-2 chromosome Fvb5-2:19604320..19604390- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-1 chromosome Fvb5-1:22952141..22952211- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:4995547..4995547. Fragaria vesca Whole Genome v1.1 Assembly & Annotation