AX-89812432, AX-89812432 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812432
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88812123
TypeSNP
SNP AllelesT/G
Probe 1AX-89812432.AX-89812432: AGGTCTAACTTTGATAGAGACTGTGGAACG
5' Flanking SequenceATTTCTCCAGATTGAAACTATCTCTGACACCTTGC
3' Flanking SequenceGGGTAGGTAAGATCGTGCCATCAATGCTGCTTCAG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812432 ID=AX-89812432; Name=AX-89812432; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ATTTCTCCAGATTGAAACTATCTCTGACACCTTGCKGGGTAGGTAAGATC
GTGCCATCAATGCTGCTTCAG
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:2725845..2725915- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:418421..418491+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:3089620..3089690+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:1953303..1953373+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:25173544..25173614+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:2485160..2485230- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:5273213..5273213. Fragaria vesca Whole Genome v1.1 Assembly & Annotation