AX-89869470, AX-89869470 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869470
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88812592
TypeSNP
SNP AllelesA/G
Probe 1AX-89869470.AX-89869470: AGAGTCACAGGTACTACTAGTCAGAACCAC
5' Flanking SequenceGTGCAGGGAAGATATCAATGTGTTGGGTTGGAACC
3' Flanking SequenceCACCAAGACTGATCATCATGGACACTGAGATAGTG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869470 ID=AX-89869470; Name=AX-89869470; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GTGCAGGGAAGATATCAATGTGTTGGGTTGGAACCRCACCAAGACTGATC
ATCATGGACACTGAGATAGTG
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:4392262..4392332+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:3666230..3666300+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:3994717..3994787+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:23790047..23790117- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:5977087..5977087. Fragaria vesca Whole Genome v1.1 Assembly & Annotation