AX-89812454, AX-89812454 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812454
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88812604
TypeSNP
SNP AllelesT/G
Probe 1AX-89812454.AX-89812454: TGGTTGGTACCTGGTTGTTTCAGCGTAAGG
5' Flanking SequenceCTGTCACCAACCATGGACCAACAAAGTCGCATTCC
3' Flanking SequenceACTACAATTTAGCACGATCTTACCATAGCAAGGTA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812454 ID=AX-89812454; Name=AX-89812454; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CTGTCACCAACCATGGACCAACAAAGTCGCATTCCKACTACAATTTAGCA
CGATCTTACCATAGCAAGGTA
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:4403944..4404014+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:3677355..3677425+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:4008869..4008939+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:5945153..5945223+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:629125..629195- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:23777352..23777422- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:5988769..5988769. Fragaria vesca Whole Genome v1.1 Assembly & Annotation