AX-89812463, AX-89812463 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812463
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88812730
TypeSNP
SNP AllelesA/G
Probe 1AX-89812463.AX-89812463: TCCCATCCTCGGTTTGAACTCGACGTAGTT
5' Flanking SequenceACAACAGGGTAGGAGCCAAACTTGAGCTGCATCAA
3' Flanking SequenceGGGCCATAAGTTTGGGATAATTTGTGAAGGGATCG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812463 ID=AX-89812463; Name=AX-89812463; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ACAACAGGGTAGGAGCCAAACTTGAGCTGCATCAARGGGCCATAAGTTTG
GGATAATTTGTGAAGGGATCG
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:4615972..4616042+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:4623167..4623237+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:3881131..3881201+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-4 chromosome Fvb1-4:3889127..3889197+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:4187687..4187757+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:4193918..4193988+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:6115786..6115856+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:6118507..6118577+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:464608..464678- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:461888..461958- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:23638159..23638229- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:6200797..6200797. Fragaria vesca Whole Genome v1.1 Assembly & Annotation