AX-89812465, AX-89812465 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812465
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88812784
TypeSNP
SNP AllelesT/G
Probe 1AX-89812465.AX-89812465: TTATCCAAGGTTCCGTCGTCATTGAACTCG
5' Flanking SequenceTCCTTAATAGGTTCCAAGGCAGCAGTAACTTGAGC
3' Flanking SequenceGGTATCCTTGTTTTGCACAAACCAGTCATGCGTAT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812465 ID=AX-89812465; Name=AX-89812465; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TCCTTAATAGGTTCCAAGGCAGCAGTAACTTGAGCKGGTATCCTTGTTTT
GCACAAACCAGTCATGCGTAT
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:4693325..4693395+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:26103..26133+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:3958170..3958240+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:4270741..4270811+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:6205450..6205512+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:5290750..5290780+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:375716..375778- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:27566789..27566819- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:6278150..6278150. Fragaria vesca Whole Genome v1.1 Assembly & Annotation