AX-89869478, AX-89869478 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869478
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88812823
TypeSNP
SNP AllelesA/G
Probe 1AX-89869478.AX-89869478: GCGGGTTACGATACTGGTAAGTGGGTTCGT
5' Flanking SequenceAGTCGTGGTGGACTTACAAGGGTTGGGTAAAGGCC
3' Flanking SequenceTGCTTGGGTGAATGGTCATAGCATTGGGCGATATT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869478 ID=AX-89869478; Name=AX-89869478; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AGTCGTGGTGGACTTACAAGGGTTGGGTAAAGGCCRTGCTTGGGTGAATG
GTCATAGCATTGGGCGATATT
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:4791039..4791109+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:14103519..14103589- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:4023019..4023089+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-4 chromosome Fvb1-4:16784387..16784457+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:4343938..4344008+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:6369063..6369133+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:6341457..6341527+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:296629..296699- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:23450925..23450995- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:23315580..23315650- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:9109258..9109328- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:6375864..6375864. Fragaria vesca Whole Genome v1.1 Assembly & Annotation