AX-89812469, AX-89812469 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812469
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88812877
TypeSNP
SNP AllelesA/G
Probe 1AX-89812469.AX-89812469: CCAAGACGTAGAGATGAAAATCGTAGTTGG
5' Flanking SequenceCAAGAGGTTCTGCATCTCTACTTTTAGCATCAACC
3' Flanking SequenceCAGTGATGAAATTTGTGAGGAGATGGGATGGACAT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812469 ID=AX-89812469; Name=AX-89812469; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CAAGAGGTTCTGCATCTCTACTTTTAGCATCAACCRCAGTGATGAAATTT
GTGAGGAGATGGGATGGACAT
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:4872809..4872879+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:4109907..4109977+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:4455638..4455708+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:6463807..6463877+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:206594..206664- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:23207935..23208005- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:6457634..6457634. Fragaria vesca Whole Genome v1.1 Assembly & Annotation