AX-89812473, AX-89812473 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812473
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88812985
TypeSNP
SNP AllelesT/G
Probe 1AX-89812473.AX-89812473: TTCAGTTTTACTCGTTAGAAGATTATTAGG
5' Flanking SequenceTTACAAAGTCAAAATGAGCAATCTTCTAATAATCC
3' Flanking SequenceGAAACCAATGATGCTAGTACTAACAGTGACACTAG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812473 ID=AX-89812473; Name=AX-89812473; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TTACAAAGTCAAAATGAGCAATCTTCTAATAATCCKGAAACCAATGATGC
TAGTACTAACAGTGACACTAG
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:5002056..5002126+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:4266274..4266344+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:4546270..4546327+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:6540708..6540778+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:126736..126806- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:6586881..6586881. Fragaria vesca Whole Genome v1.1 Assembly & Annotation