AX-89812474, AX-89812474 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812474
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88812996
TypeSNP
SNP AllelesA/G
Probe 1AX-89812474.AX-89812474: ACACCACGATACGGGCGTAAACTATGAAGG
5' Flanking SequenceGTGGCTGTGGTGCTATGCCCGCATTTGATACTTCC
3' Flanking SequenceACCGTATTCATGTACGTCTTCCTCATCTTATTGGT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812474 ID=AX-89812474; Name=AX-89812474; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GTGGCTGTGGTGCTATGCCCGCATTTGATACTTCCRACCGTATTCATGTA
CGTCTTCCTCATCTTATTGGT
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:5007369..5007439+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:4271979..4272049+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:6546483..6546553+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:121406..121476- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:23101504..23101574- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:6592194..6592194. Fragaria vesca Whole Genome v1.1 Assembly & Annotation