AX-89812475, AX-89812475 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812475
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88813030
TypeSNP
SNP AllelesA/G
Probe 1AX-89812475.AX-89812475: TCAGGGAAGTTATCTAGTAGAATGTAGTGG
5' Flanking SequenceCAAATAGTCCCTTCAATAGATCATCTTACATCACC
3' Flanking SequenceAAACTGGGGTATTGTGACATGTTCCATGTGGAGAA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812475 ID=AX-89812475; Name=AX-89812475; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CAAATAGTCCCTTCAATAGATCATCTTACATCACCRAAACTGGGGTATTG
TGACATGTTCCATGTGGAGAA
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:5032662..5032732+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:4296148..4296218+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:4589199..4589269+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:6570110..6570180+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:97547..97617- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:23079920..23079990- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:6617487..6617487. Fragaria vesca Whole Genome v1.1 Assembly & Annotation