AX-89869483, AX-89869483 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869483
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88813117
TypeSNP
SNP AllelesA/G
Probe 1AX-89869483.AX-89869483: CCAAACGTCAACACAACTGTTATTAAGTGG
5' Flanking SequenceAGGAAAACAATTAAGTTGGGTGGCACATACCTATC
3' Flanking SequenceGGTGAATTATTGTCAACACAACTGCAAACCCTGTT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869483 ID=AX-89869483; Name=AX-89869483; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AGGAAAACAATTAAGTTGGGTGGCACATACCTATCRGGTGAATTATTGTC
AACACAACTGCAAACCCTGTT
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:5114812..5114882+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:4378620..4378690+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:4660751..4660821+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:6643881..6643951+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:23472914..23472984+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:4830165..4830235- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:24091..24161- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:6699637..6699637. Fragaria vesca Whole Genome v1.1 Assembly & Annotation