AX-89812481, AX-89812481 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812481
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88813154
TypeSNP
SNP AllelesA/G
Probe 1AX-89812481.AX-89812481: ATTTCTCCTTCTGAATGTCGTCATGAACGT
5' Flanking SequenceGCCGATAAAGAGGAAGACTTACAGCAGTACTTGCA
3' Flanking SequenceGGACCTTCATCTTAGGGAGACCCAAGAACCCAGTC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812481 ID=AX-89812481; Name=AX-89812481; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GCCGATAAAGAGGAAGACTTACAGCAGTACTTGCARGGACCTTCATCTTA
GGGAGACCCAAGAACCCAGTC
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:5231251..5231321+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:4510105..4510175+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:4691386..4691456+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:6818223..6818293+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:4988806..4988876- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:4799530..4799600- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:22965584..22965654- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:6816076..6816076. Fragaria vesca Whole Genome v1.1 Assembly & Annotation