AX-89812493, AX-89812493 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812493
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88813578
TypeSNP
SNP AllelesA/C
Probe 1AX-89812493.AX-89812493: TTTTGACTTTTGTAGACGGAACACTAGCAT
5' Flanking SequenceATGCCAAAACTGAAAACATCTGCCTTGTGATCGTA
3' Flanking SequenceGGTTTGTGTTCAATGACCTTCATTTAAGTAGTAAA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812493 ID=AX-89812493; Name=AX-89812493; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ATGCCAAAACTGAAAACATCTGCCTTGTGATCGTAMGGTTTGTGTTCAAT
GACCTTCATTTAAGTAGTAAA
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:5852767..5852837+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:5103461..5103531+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:5827043..5827113+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:7322575..7322645+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:22322694..22322764- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:7437592..7437592. Fragaria vesca Whole Genome v1.1 Assembly & Annotation