AX-89812497, AX-89812497 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812497
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88813708
TypeSNP
SNP AllelesT/G
Probe 1AX-89812497.AX-89812497: ATACCTACTACAAACCAATCTCCTCTGCGG
5' Flanking SequenceGGAGCTATGGATGATGTTTGGTTAGAGGAGACGCC
3' Flanking SequenceGTTATTATTCAGGACGTTCTCTACGAGGATATTAG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812497 ID=AX-89812497; Name=AX-89812497; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GGAGCTATGGATGATGTTTGGTTAGAGGAGACGCCKGTTATTATTCAGGA
CGTTCTCTACGAGGATATTAG
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:9614099..9614424+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6 chromosome Fvb6:3176024..3176085+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6 chromosome Fvb6:4116278..4116341+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb4 chromosome Fvb4:9345413..9345473+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3 chromosome Fvb3:18327699..18327762+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:5991340..5991410+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
FvbUn chromosome FvbUn:586573..586636- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-2 chromosome Fvb7-2:2825417..2825449+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:11245757..11245820+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:7168932..7168995+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:7626654..7626686- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb4-4 chromosome Fvb4-4:1150524..1150594- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:7576165..7576165. Fragaria vesca Whole Genome v1.1 Assembly & Annotation