AX-89869516, AX-89869516 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869516
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88814003
TypeSNP
SNP AllelesT/G
Probe 1AX-89869516.AX-89869516: GGTACATCAGCGATATCTCTTGACGATCTT
5' Flanking SequenceAATGGAACTGTCTGCAACATGCTTTGTCTTCAGCC
3' Flanking SequenceTTCTAGCAGTTCTCTATAGCGACTACATGGTTGCA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869516 ID=AX-89869516; Name=AX-89869516; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AATGGAACTGTCTGCAACATGCTTTGTCTTCAGCCKTTCTAGCAGTTCTC
TATAGCGACTACATGGTTGCA
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:6420289..6420359+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:5717482..5717552+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:7913354..7913424+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:6497896..6497966- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:21677625..21677695- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:8005114..8005114. Fragaria vesca Whole Genome v1.1 Assembly & Annotation