AX-89869524, AX-89869524 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869524
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88814292
TypeSNP
SNP AllelesT/G
Probe 1AX-89869524.AX-89869524: GGGTACCGAACGGAAGCCAGTGTATTAGGG
5' Flanking SequenceCCTTTGCGAGCTATGTGCTTGGCGACCTCAAGAAA
3' Flanking SequenceGGGATTATGTGACCGAAGGCAAGCCATGGGAACAA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869524 ID=AX-89869524; Name=AX-89869524; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CCTTTGCGAGCTATGTGCTTGGCGACCTCAAGAAAKGGGATTATGTGACC
GAAGGCAAGCCATGGGAACAA
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:6828708..6828778+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:6822451..6822521+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:12638857..12638927- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:12643669..12643739- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:12616082..12616152- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:6187868..6187938+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-4 chromosome Fvb1-4:6180921..6180991+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:16293085..16293155+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:16335480..16335550+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:16281538..16281603+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-4 chromosome Fvb1-4:10448489..10448559- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-4 chromosome Fvb1-4:10322484..10322554- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:8413533..8413533. Fragaria vesca Whole Genome v1.1 Assembly & Annotation