AX-89812524, AX-89812524 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812524
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88814652
TypeSNP
SNP AllelesA/G
Probe 1AX-89812524.AX-89812524: GCCGCGTTAAGAGCAGCGAAAATAGCGAGG
5' Flanking SequenceGGCGGCGGCGCAATTCTCGTCGCTTTTATCGCTCC
3' Flanking SequenceGAAGTGCTTGCCGCCGCTAAAAGCGCTTGTGACGG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812524 ID=AX-89812524; Name=AX-89812524; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GGCGGCGGCGCAATTCTCGTCGCTTTTATCGCTCCRGAAGTGCTTGCCGC
CGCTAAAAGCGCTTGTGACGG
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:532186..532256+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3 chromosome Fvb3:16111841..16111911+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:20475133..20475203+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3 chromosome Fvb3:1274319..1274384- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:2760985..2761055+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:42483022..42483092+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-4 chromosome Fvb3-4:8360506..8360576- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:9016683..9016683. Fragaria vesca Whole Genome v1.1 Assembly & Annotation