AX-89869545, AX-89869545 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869545
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88814942
TypeSNP
SNP AllelesA/C
Probe 1AX-89869545.AX-89869545: AAACAGATATAGACTGGATATAACAAGGTT
5' Flanking SequenceTACAAAGATGGCAAGGATACAACACTGACTTATCC
3' Flanking SequenceTTGGAACAATATAGGTCAGATATAGACAAAACTGT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869545 ID=AX-89869545; Name=AX-89869545; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TACAAAGATGGCAAGGATACAACACTGACTTATCCMTTGGAACAATATAG
GTCAGATATAGACAAAACTGT
Alignments
Feature NameTypeLocationAnalysis
Fvb4 chromosome Fvb4:16085785..16085841+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2 chromosome Fvb2:11891716..11891756+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:21373537..21373607+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb2-4 chromosome Fvb2-4:1100232..1100272+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-1 chromosome Fvb2-1:871172..871212+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-4 chromosome Fvb1-4:22659166..22659236+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:28609247..28609317+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-3 chromosome Fvb2-3:22174634..22174674- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-2 chromosome Fvb2-2:21892064..21892104- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb2-2 chromosome Fvb2-2:21900817..21900857- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:9915087..9915087. Fragaria vesca Whole Genome v1.1 Assembly & Annotation