AX-89812198, AX-89812198 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812198
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88815088
TypeSNP
SNP AllelesA/G
Probe 1AX-89812198.AX-89812198: AAATACGAAACGACTAAAATGTCCTGTCGG
5' Flanking SequenceTCTGTTTTATGCTTTGCTGATTTTACAGGACAGCC
3' Flanking SequenceAAACGGCATCTTCTCACGACAGGTTGGAGTGTATT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812198 ID=AX-89812198; Name=AX-89812198; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TCTGTTTTATGCTTTGCTGATTTTACAGGACAGCCRAAACGGCATCTTCT
CACGACAGGTTGGAGTGTATT
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:13599522..13599592+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:17962312..17962382+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:25202626..25202695+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:26993785..26993854- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:1041892..1041961- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:10281077..10281077. Fragaria vesca Whole Genome v1.1 Assembly & Annotation