AX-89812202, AX-89812202 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812202
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88815132
TypeSNP
SNP AllelesT/G
Probe 1AX-89812202.AX-89812202: CTCACGATCTCAACAGAAAGGTGATGAAAG
5' Flanking SequenceGCATGGAGTGCTAGAGTTGTCTTTCCACTACTTTC
3' Flanking SequenceGGACCAAATATCTGGTAATAAACACAAGCATATAA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812202 ID=AX-89812202; Name=AX-89812202; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GCATGGAGTGCTAGAGTTGTCTTTCCACTACTTTCKGGACCAAATATCTG
GTAATAAACACAAGCATATAA
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:13714536..13714606+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:18040720..18040790+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:25846679..25846749+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:26863072..26863142- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:902070..902140- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:10396091..10396091. Fragaria vesca Whole Genome v1.1 Assembly & Annotation