AX-89869228, AX-89869228 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869228
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88815148
TypeSNP
SNP AllelesA/C
Probe 1AX-89869228.AX-89869228: CAGTTTTTTCTTCCTTCTTCTTCGAACCGG
5' Flanking SequenceCTCCTTTCTCCGGCGGAACTTCTTCTTCCTTTCTC
3' Flanking SequenceGGCCAAGCTTCTTCTTCCTTCTTTTTTGACGCAGC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869228 ID=AX-89869228; Name=AX-89869228; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CTCCTTTCTCCGGCGGAACTTCTTCTTCCTTTCTCMGGCCAAGCTTCTTC
TTCCTTCTTTTTTGACGCAGC
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:9150079..9150149+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:13859666..13859718+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5 chromosome Fvb5:9493583..9493640+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:8582074..8582144+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:1729451..1729575+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb4 chromosome Fvb4:15340064..15340116- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb4-1 chromosome Fvb4-1:1769647..1769708+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb4-4 chromosome Fvb4-4:25641859..25641920- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb4-3 chromosome Fvb4-3:15273606..15273654- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-4 chromosome Fvb1-4:15707119..15707189- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:10428021..10428021. Fragaria vesca Whole Genome v1.1 Assembly & Annotation