AX-89812212, AX-89812212 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812212
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88815606
TypeSNP
SNP AllelesA/G
Probe 1AX-89812212.AX-89812212: AGGATGACAAAACATCCAAAATCCGTGTGG
5' Flanking SequenceATTTATCCTACTGTTTTGTAGGTTTTAGGCACACC
3' Flanking SequenceACGAGGGAGGAAATTAAATGCATGAACCCTAATTA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812212 ID=AX-89812212; Name=AX-89812212; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ATTTATCCTACTGTTTTGTAGGTTTTAGGCACACCRACGAGGGAGGAAAT
TAAATGCATGAACCCTAATTA
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:13823586..13823656+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:17153289..17153359- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:20070322..20070392- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:20737412..20737482- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:8248318..8248388- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:11896121..11896121. Fragaria vesca Whole Genome v1.1 Assembly & Annotation