AX-89812216, AX-89812216 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812216
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88815793
TypeSNP
SNP AllelesA/C
Probe 1AX-89812216.AX-89812216: AGGTCAAAGACTAAGATCTTACAGACGTGG
5' Flanking SequenceTTTGTTCCAGTTTCTGATTCTAGAATGTCTGCACC
3' Flanking SequenceATTGTTCTTGTTATAGACGAGTGTTTAGATGAACC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812216 ID=AX-89812216; Name=AX-89812216; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TTTGTTCCAGTTTCTGATTCTAGAATGTCTGCACCMATTGTTCTTGTTAT
AGACGAGTGTTTAGATGAACC
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:14268129..14268199+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-1 chromosome Fvb1-1:9311657..9311726+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-4 chromosome Fvb1-4:16577105..16577175- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:19572237..19572307- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:19928534..19928604- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:12340664..12340664. Fragaria vesca Whole Genome v1.1 Assembly & Annotation