AX-89812238, AX-89812238 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812238
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88816466
TypeSNP
SNP AllelesT/G
Probe 1AX-89812238.AX-89812238: TAAAGGAGATCGTGACAAGGTCTAGCTTAA
5' Flanking SequenceATCCAATTTCCTCTAGCACTGTTCCAGATCGAATT
3' Flanking SequenceGGCAAGCCAAAGCACTAGCAACCTGAATGATGTGA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812238 ID=AX-89812238; Name=AX-89812238; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ATCCAATTTCCTCTAGCACTGTTCCAGATCGAATTKGGCAAGCCAAAGCA
CTAGCAACCTGAATGATGTGA
Alignments
Feature NameTypeLocationAnalysis
Fvb6 chromosome Fvb6:4386035..4386105+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-4 chromosome Fvb6-4:5482246..5482316+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-3 chromosome Fvb6-3:37378123..37378193- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-2 chromosome Fvb6-2:23248842..23248912- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:31813463..31813533- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:13695022..13695022. Fragaria vesca Whole Genome v1.1 Assembly & Annotation