AX-89812259, AX-89812259 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812259
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88816868
TypeSNP
SNP AllelesA/C
Probe 1AX-89812259.AX-89812259: AAGTACACTTAGGTTAGAAACTCTATCCGG
5' Flanking SequenceTCCTCTTCATGTGAATCCAATCTTTGAGATAGGCC
3' Flanking SequenceTGTCGAGCCAAGATTCTCAGAATGGTTGGTATTTG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812259 ID=AX-89812259; Name=AX-89812259; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TCCTCTTCATGTGAATCCAATCTTTGAGATAGGCCMTGTCGAGCCAAGAT
TCTCAGAATGGTTGGTATTTG
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:10697482..10697552+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:8978584..8978654+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:10007289..10007359+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:11159705..11159775+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-1 chromosome Fvb1-1:17939666..17939736- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:14725186..14725186. Fragaria vesca Whole Genome v1.1 Assembly & Annotation