AX-89812271, AX-89812271 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812271
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88817172
TypeSNP
SNP AllelesA/C
Probe 1AX-89812271.AX-89812271: CTCGAATTCGGGCCGCTGGACCTAGTTTTA
5' Flanking SequenceGTCAGGAGCTTAAGCCCGGCGACCTGGATCAAAAT
3' Flanking SequenceGGAACCGCCGAGCACCGAGACATGACTTTGGAGAG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812271 ID=AX-89812271; Name=AX-89812271; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GTCAGGAGCTTAAGCCCGGCGACCTGGATCAAAATMGGAACCGCCGAGCA
CCGAGACATGACTTTGGAGAG
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:11330821..11330891+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb4-1 chromosome Fvb4-1:16602322..16602392+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb4-4 chromosome Fvb4-4:3779959..3780011- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:15358525..15358525. Fragaria vesca Whole Genome v1.1 Assembly & Annotation