AX-89869304, AX-89869304 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89869304
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88817546
TypeSNP
SNP AllelesA/G
Probe 1AX-89869304.AX-89869304: CCAAACTAGTAGTTTGACACTGACGAGGGG
5' Flanking SequenceCCTTACTAAACGAATCTGGATGCAGATTTATACTT
3' Flanking SequenceGGGGAGCAGTCACAGTTTGATGATCAAACCACTCC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89869304 ID=AX-89869304; Name=AX-89869304; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CCTTACTAAACGAATCTGGATGCAGATTTATACTTRGGGGAGCAGTCACA
GTTTGATGATCAAACCACTCC
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:18517909..18517979+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:18509566..18509636+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:18669230..18669298+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:3681759..3681826+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:15910538..15910607+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-4 chromosome Fvb1-4:3011828..3011873+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-4 chromosome Fvb1-4:12971518..12971586- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:14797777..14797847- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:16536569..16536569. Fragaria vesca Whole Genome v1.1 Assembly & Annotation