AX-89812306, AX-89812306 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812306
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88817566
TypeSNP
SNP AllelesA/C
Probe 1AX-89812306.AX-89812306: TTCGTGTTAGTCGTGGTAGATTATATTCGG
5' Flanking SequenceTGCTGAAGCACAATCAGCACCATCTAATATAAGCC
3' Flanking SequenceTGGATCTTCTTTAACACCCAATTCCAACTCCTCAT
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812306 ID=AX-89812306; Name=AX-89812306; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TGCTGAAGCACAATCAGCACCATCTAATATAAGCCMTGGATCTTCTTTAA
CACCCAATTCCAACTCCTCAT
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:18707290..18707360+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-3 chromosome Fvb1-3:15728744..15728814- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:15708534..15708604- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:16847264..16847334- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:16725950..16725950. Fragaria vesca Whole Genome v1.1 Assembly & Annotation