AX-89812307, AX-89812307 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89812307
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88817570
TypeSNP
SNP AllelesA/G
Probe 1AX-89812307.AX-89812307: CTGGTTAAGTAGGTTCTATCGAAGTAGTAC
5' Flanking SequenceTGGTAGACCAATTCATCCAAGATAGCTTCATCATG
3' Flanking SequenceGGAAGGCTCCAGTCCACATTCCTTCGACAGAATAC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentCodon-based SNP
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89812307 ID=AX-89812307; Name=AX-89812307; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TGGTAGACCAATTCATCCAAGATAGCTTCATCATGRGGAAGGCTCCAGTC
CACATTCCTTCGACAGAATAC
Alignments
Feature NameTypeLocationAnalysis
Fvb1 chromosome Fvb1:18710899..18710969+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:18709307..18709362- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1-3 chromosome Fvb1-3:15726736..15726800+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:15704973..15705043- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-3 chromosome Fvb1-3:15725215..15725255- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb1-2 chromosome Fvb1-2:16845351..16845421- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG1 chromosome LG1:16729559..16729559. Fragaria vesca Whole Genome v1.1 Assembly & Annotation